Dr. Shuvra Kanti Dey Assistant Professor, Department of Microbiology

Research Interest

Molecular Epidemiology, Virology, Public Health, Clinical Microbiolgy

Others

Publication:
h-index factor: 12 (Google Scholar)
Total Number of Publications: 58 (International-58)
Book Chapter: 3 Published as a first Author 2 (International-3)
Full Publications: 31 Published as a first Author 20 (International-31)
Conference Papers: 24 (First Author 13, International-24).

(Full Publications)

Book Chapter:

1. Dey SK, T Fujimoto, H Ushijima. 2011. Adenovirus Diarrhea: Types, Diagnosis and Treatments. In: Advances in Medicine and Biology (Leon V. Berhardt) Volume 38, pp. 275-286. Nova Science Publishers, Inc, NY, USA.

2. Dey SK, S Okitsu, H Ushijima. 2011. Diarheal Viruses: Classificiation, Morphology, Genome Organization, Molecular Detection, Treatment In: Diarrhea: Causes, Types and Treatments, Public health in the 21st Century, (Hannah M. Wilson), pp. 71-96, Nova Science Publishers, Inc, NY, USA.


3. H Yang. Dey SK, R Buchanan, D Biswas. 2014. Pest in Poultry, Poultry Product-Borne Infection and Future Precautions. In: Practical Food Safety: Contemporary Issues and Future Directions (Rajeev Bhat and Vicente Gomez-Lopez), Wiley-Blackwell 9600 Garsington Road, Oxford OX4 2DQ, pp. 535-552.

Full Publication:

1. Dey SK, Hayakawa Y, Rahman M, Islam R, Mizuguchi M, Okitsu S, Ushijima H. G2 strain of rotavirus among infants and children, Bangladesh . Emerg Infect Dis, 15(1): 91-94, January, 2009.

2. Dey SK, Zahan N, Afrose S, Islam T, Sahjahan M, Saha S, Mahmud SI, Talukder AA. Mizuguchi M, Ushijima H. 2014. Molecular Epidemiology of HIV in Asia. hiv & aids review 2014; 13(2):33-39.
3. Matsushima Y, Shimizu H, Kano A, Nakajima E, Ishimaru Y, Dey SK, Watanabe Y, Adachi F, Suzuki K, Mitani K, Fujimoto T, Phan TG, Ushijima H. 2012. Emerg Infect Dis. 2012 May;18(5):846-8.

4. Dey SK, Phathammavong O, Nguyen TD, Thongprachum A, Chan-It W, Okitsu S, Mizuguchi M, Ushijima H. Seasonal pattern and genotype distribution of sapovirus infection in Japan, 2003-2009. Epidemiol Infect. 2012 Jan;140(1):74-7.

5. Dey SK, Phathammavong O, Okitsu S, Mizuguchi M, Ohta Y, Ushijima H. Seasonal pattern and genotype distribution of norovirus infection in Japan. Pediatr Infect Dis J. 2010 May;29(5):e32-4.

6. Dey SK, Phan TG, Mizuguchia M, Okitsua S, Ushijima H. Novel recombinant norovirus in Japan. Virus Genes. 2010 Jun;40(3):362-4.

7. Dey SK, Ushijima H, Phathammavong O, Chanit W, Okitsu S, Mizuguchi M, Ohta Y. Seasonal trend and serotype distribution of rotavirus infection in Japan, 1981-2008. Pediatr Infect Dis J, 29(2):166-7, January, 2010.

8. Dey SK. Shamsun N, Tanzina A, Hoomyra S, Farjana A, Anjuman A, Firoz A, Ali T. 2014. A retrospective analysis of viral gastroenteritis in Asia. The Journal of pediatric Infectious Diseases (In Press).


9. Ushijima H, Suichi N, Aksara T, Yuko SO, Dinh NT, Ngan TKP, Sayaka T, Dey SK, Shoko O, Wataru Y, Masashi M, Satoshi H. 2014. Sensitive and rapid detection of Campylobacter species from stools of diarrheal children in Japan by LAMP method. Japanese Journal of Infectious Diseases (In Press).

10. Dey SK, Karim S, Islam R, Islam T, Islam S. 2014. Molecular Epidemiology of Influenza in Asia. Estern Journal of Medicine (Accepted).

11. Dey SK, I Hoq, Satoshi H, Okitsu S, Ushijima H. 2012. Comparison of Immunochromatoghraphy, PCR and culture methods for the detection of Campylobacte. J Microbiol Methods. 2012 Dec;91(3):566-8.

12. Dey SK, I Hoq, Satoshi H, Okitsu S, Ushijima H. 2012. The prevalence, seasonality, peak age of infection of enteric adenoviruses in Japan. Epidemiol Infect. 2013 May;141(5):958-60.

13. Dey SK, Phan TG, Nishimura S, Mizuguchi M, Okitsu S, Ushijima H. Molecular and epidemiological trend of sapovirus, and astrovirus infection in Japan. J Trop Pediatr. 56(3):205-7, December 2009.

14. Dey SK, Thongprachum A, Ohta Y, Phan TG, Nishimura S, Mizuguchi M, Okitsu S, Ushijima H. Molecular and epidemiological trend of rotavirus infection among infants and children in Japan. Infect Genet Evol, 9(5):955-961, September 2009.

15. Dey SK, Thongprachum A, Islam AR, Phan TG, Rahman M, Mizuguchi M, Okitsu S, Ushijima H. Molecular analysis of G3 rotavirus among infants and children in Dhaka City , Bangladesh after 1993. Infect Genet Evolution, 9(5):983-986, September 2009.

16. Dey SK, Shimizu H, Phan TG, Hayakawa Y, Islam A, Salim AF, Khan AR, Mizuguchi M, Okitsu S, Ushijima H. Molecular epidemiology of adenovirus infection among infants and children with acute gastroenteritis in Dhaka City, Bangladesh. Infect Genet Evolution, 9(4):518-522, July 2009.

17. Dey SK, Islam A, Mizuguchi M, Okitsu S, Ushijima H. Epidemiological and molecular analysis of astrovirus gastroenteritis in Dhaka City, Bangladesh. J Trop Pediatr, 54(6):423-425, December 2008.

18. Dey SK, Nguyen TA, Phan TG, Nishio O, Salim AF, Rahman M, Yagyu F, Okitsu S, Ushijima H. Molecular and epidemiological trend of norovirus associated gastroenteritis in Dhaka City , Bangladesh . J Virol, 40(3):218-223, November 2007.

19. Dey SK, Phan TG, Nguyen TA, Nishio O, Salim AF, Yagyu F, Okitsu S, Ushijima H. Prevalence of sapovirus infection among infants and children with acute gastroenteritis in Dhaka City, Bangladesh during 2004-2005. J Med Virol, 79(5):633-638, May 2007.

20. Dey SK, Mizuguchi M, Okitsu S, Ushijima H. Novel recombinant sapovirus in Bangladesh, Clin Lab. 2011;57(1-2):91-4.

21. Dey SK, Phan TG, Mizuguchi M, Okitsu S, Ushijima H. 2011. Genetic diversity and emergence of norovirus GII/4-2006b in Japan during 2006-2007. Clin Lab. 2011;57(3-4):193-9.

22. Chan-it W, Thongprachum A, Dey SK, Phan TG, Khamrin P, Okitsu S, Nishimura S, Kobayashi M, Kikuta H, Baba T, Yamamoto A, Sugita K, Hashira S, Tajima T, Ishida S, Mizuguchi M, Ushijima H. Detection and genetic characterization of rotavirus infections in non-hospitalized children with acute gastroenteritis in Japan, 2007-2009. Infect Genet Evol. 2011 Mar;11(2):415-22.

23. Khamrin P, Dey SK, Chan-It W, Thongprachum A, Satou K, Okitsu S, Maneekarn N, Ushijima H. Evaluation of a Rapid Immunochromatography Strip Test for Detection of Astrovirus in Stool Specimens. J Trop Pediatr, July 3 ;56(2):129-31. 2009.

24. Pham NT, Trinh QD, Nguyen TA, Dey SK, Phan TG, Hoang LP, Khamrin P, Maneekarn N, Okitsu S, Mizuguchi M, Ushijima H. Development of genotype-specific primers for differentiation of genotypes A and B of Aichi viruses. J Virol Methods, 156(1-2):107-110, March 2009.

25. Pham NT, Trinh QD, Khamrin P, Nguyen TA, Dey SK, Phan TG, Hoang le P, Maneekarn N, Okitsu S, Mizuguchi M, Ushijima H. Sequence analysis of the capsid gene of Aichi viruses detected from Japan, Bangladesh, Thailand, and Vietnam. J Med Virol, 80(7):1222-1227, July 2008.

26. Phan TG, Khamrin P, Trinh QD, Dey SK, Takanashi S, Okitsu S, Maneekarn N, Ushijima H. Emergence of intragenotype recombinant sapovirus in Japan. Infect Genet Evol, 7(4):542-546, March 2007.

27. Phan TG, Khamrin P, Trinh QD, Dey SK, Takanashi S, Okitsu S, Maneekarn N, Ushijima H. Detection and genetic characterization of group A rotavirus strains circulating among children with acute gastroenteritis in Japan. J Virol, 81(9):4645-4653, .May 2007.

28. Phan TG, Khamrin P, Trinh DQ, Dey SK, Yagyu F, Okitsu S, Nishio O, Ushijima H. Genetic characterization of group A rotavirus strains circulating among children with gastroenteritis in Japan in 2004-2005. Infect Genet Evol, 7(2):247-253, July 2007.

29. Pham NT, Khamrin P, Nguyen TA, Dey SK, Phan TG, Okitsu S, Ushijima H. Isolation and molecular characterization of Aichi viruses from fecal specimens collected in Japan, Bangladesh, Thailand, and Vietnam. J Clin Microbiol, 45(7):2287-2288, Jul 2007.

30. Phan TG, Yan H, Khamrin P, Trinh QD, Dey SK, Yagyu F, Okitsu S, Muller WE, Ushijima H. Novel intragenotype recombinant sapovirus in Japan. Clin Lab, 52(7-8):363-366, 2006.

31. Dey SK, Jody ML, Paola AC, Steven CR. 2013 Growth and survival of Lactobacillus and Bifidobacterium in milks with or without linoleic acid. International Journal of Probiotics and prebiotics (Accepted).

Conference paper:
1. Almario JA, Dey SK, Biswas D. Determination of efficacy and role of egg-yolk antibody (IgY) against Salmonella colonization in chicken cells. 26 th Annual symposium at Dept. of Animal and avian sciences, University of Maryland, College Park, May 30, 2012.

2. Dey SK, Okitsu S, H Ushijima. Prevalence and development of Immunochromatography test for Campylobacter in diarrheal stool samples in Japan. 86th Annual conference of The Japanese Society for Infectious Diseases. April 2011, Tokyo, Japan.

3. Dey SK, Shimizu H, Okitsu S, Ushijima H. Complete genome sequence and phylogenetic analysis of three Japanese Sapovirus isolates. 58th Annual Conference of Japanese Society for Virology. November 2010. Tokushima, Japan.

4. Dey SK, Nishimura S, H Ushijima. Immunochromatography test for Campylobacter in diarrheal stool samples.International Conference on Campylobacter, February 2011, Kobe, Japan.

5. Dey SK, Shimizu H, Okitsu S, Ushijima H. Seasonal pattern of norovirus and rotavirus infection in Japan. The 43rd Annual Meeting of the Japanese Society for Pediatric Infectious Diseases, October 2010. Fukoshima, Japan.

6. Dey SK, Shimizu H, Okitsu S, Ushijima H.Seasonal pattern and genotype distribution of rotavirus infection in Japan. The 42nd Annual Meeting of the Japanese Society for Pediatric Infectious Diseases, November 2010. Fukoi, Japan.

7. Dey SK, Shimizu H, Okitsu S, Ushijima H. Novel recombinant sapovirus in Bangladesh. 57th Annual Conference of Japanese Society for Virology. October 2009. Tokyo, Japan.

8. Dey SK, Ichida S, Ushijima H. Vaccine for rotavirus and other diarrheal organisms. Pediatric Academic Societies and Asian Society for Pediatric Research Joint Meeting. Invited speech, May 2008, Honolulu, Hawaii, USA.

9. Dey SK, Phan TG, Yagyu F, Okitsu S, Ushijima H. Gastroenteris in Dhaka City, Bangladesh during 2004 to 2005. 2nd Congress of Asian Society for Pediatric Research. December 2006, Yokohama, Japan.

10. Dey SK, Shimizu H, Okitsu S, Ushijima H. Molecular epidemiology of rare adenovirus infection amonh infants and children with acute gastroenteritis in Dhaka City, Bangladesh. 55th Annual Conference of Japanese Society for Virology. October 2007. Sapporo, Japan.

11. Dey SK, Phan TG, Nguyen TA, Yagyu F, Okitsu S, Ushijima H Sapovirus infection among infants and children with acute gastroenteritis in Dhaka City, Bangladesh. 54th Annual Conference of Japanese Society for Virology. November 2006, Nagoya, Japan.

12. Dey SK, Quang TD, Okitsu S, Ushijima H. Molecular epidemiology of viral gastroenteritis in Dhaka City, Bangladesh. 80th Annual Conference of Japanese Association for infectious diseases. April 2006, Yokoyama, Japan.

13. Dey SK, Phan TG, Nguyen TA, Takanashi S, Yagyu F, Okitsu S, Ushijima H. Molecular and epidemiological trend of norovirus associated gastroenteritis in Dhaka City, Bangladesh. 34th Conference of Tropical Medicine and Health. P-175, October 2006, Nagasaki, Japan.

14. Dey SK, Quang TD, Okitsu S, Ushijima H. Molecular epidemiology of viral gastroenteritis in Dhaka City, Banglades. 80 th Annual conference for the Japanese Association for Infectious Diseases. April 2006, Tokyo, Japan.

15. Ushijima H, Khamrin P, Nguyen TA, TG Phan, Takanashi S, Dey SK, Chanit W, Thongprachum, Okitsu S, Maneekarn N. Molecular epidemiology of rotavirus in Asia.10th International Symposium on dsRNA viruses. P-56, June 2009, Australia.

16. Ushijima H, Dey SK, Phan TG, Nguyen TA, Khamrin P, Takanashi S, Okitsu S, Maneekarn N. Molecular epidemiology of norovirus infection in Asia, 14th International congress of Virology. VOP, P-11, August 2008, Istanbul.

17. Ushijima H, Ichida S, Dey SK. Vaccine for diarrheal viruses. Pediatric Academic Societies and Asian Society for Pediatric Research Joint Meeting. Invited speech, May 2008, Honolulu, Hawaii, USA.

18. Ushijima H, Dey SK, Phan TG, Khamrin P, Nguyen TA, Okitsu S. Viral Gastroenteritis in Asia. The 14th International symposium on health-related water microbiology. Key note speech, September 2007, Tokyo, Japan.

19. Ushijima H, Phan TG, Khamrin P, Dey SK, Quang TD, Takanashi S, Yan H, Okitsu S. Detection and molecular epidemiology of diarrheal viruses in Japan and Asia. 2nd Congress of Asian Society for Pediatric Research. December 2006, Yokohama, Japan.

20. Khamrin P, Dey SK, Quang TD, Takanashi S, Okitsu S. Ushijima H. Animal-origins of unusual rotavirus strains circulating in Asia. 2010. The 3rd International workshop on rotavirus vaccine in China.

21. Ushijima H, Phan TG, Khamrin P, Dey SK, Quang TD, Takanashi S, Yan H, Okitsu S, Maneekarn N. Molecular Epidemiology of Rotavirus in Asia. 2010. The 3rd International workshop on rotavirus vaccine in China.

22. Okitsu S, Nguyen TA, Dey SK, Khamrin P, Ushijima H. Evaluation of the immunochromatrography test for rapid detection of norovitus antigen in stool samples. XIV International congress of Virology. August 2008, Istambul, Turkey.

23. Quang TD, Dey SK, Ushijima H. Amino acid substitution in VP7 sequences of human rotavirus A serotype G1 strains isolated in Japan, China, Thailand and Vietnam in 2002-2003. 80 th Annual conference for the Japanese Association for Infectious Diseases. April 2006, Tokyo, Japan.

24. Pham N, Khamrin P, Tuan N, Dey SK, Phan TG, Okitsu S, Ushijima H. Isolation and molecular characterization of the Aichi viruses from fecal specimens collected in Japan, Bangladesh, Thailand and Vietnam. 54th Annual Conference of Japanese Society for Virology. November 2006, Nagoya, Japan.